app.anakior/atlas-mind

app.anakior/atlas-mind

Atlas Mind MCP server exposes 24 tools to read, write, triage, map, rewind, and audit a knowledge base stored as plain files in a git repository, enabling AI assistants to act as an external brain.

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README

Atlas Mind

Live demo Licence: AGPL v3 Python 3.11+ Dependencies: standard library Database: none

<!-- mcp-name: app.anakior/atlas-mind -->

It's your mind, not someone else's.

Notion, and every hosted notes app, ask you to pour your thinking into their structure, on their servers, in their format. You rent the space; they hold the keys. Atlas Mind inverts that: your knowledge is plain files in your own git repository, served by an engine you can read line by line and throw away without losing a single note. Your AI comes to your library through an open protocol; it never pulls your brain into its own.

Own the data. Own the engine. Own the mind.

<p align="center"> <img alt="Atlas Mind viewer" width="900" src="https://github.com/user-attachments/assets/726ab344-b024-425f-a5ee-f56d97a886c7" /> </p>

🔗 Try the live demo → (offline build, some features missing) · What is Atlas Mind?

Atlas Mind is a self-hostable wiki / knowledge base engine, and an external brain you share with your AI. It serves a single-page viewer from a folder of documents (a mind), keeping the engine (the code) cleanly decoupled from your content (your notes, in their own git repository). Built on three ideas:

  • Multi-format, not just Markdown. Markdown is first-class (rendered, linked, searched). Standalone HTML decks and dashboards, PDFs, and Word .docx are previewed inline, converted to readable HTML in your browser, nothing uploaded anywhere.
  • AI-native. It exposes an MCP endpoint (twenty-four tools to read, write, triage, map, rewind and audit your mind), and atlas init scaffolds the conventions (AGENTS.md, agents/, ai-sessions/) so an assistant knows how to use your mind.
  • Lightweight & self-contained. A single Python HTTP server on the standard library: no database, accounts and share links live as plain JSON on disk, frontend libraries and fonts are vendored. A running instance makes no third-party network calls: your mind never leaves your disk, and nothing you write trains anyone's model.

It is not a multi-tenant SaaS, a real-time collaborative editor, or a plugin marketplace. One focused mind per instance, fully yours.

Install

Installing puts a self-contained atlas command on your PATH (the viewer assets ship inside the package, no separate download).

# Easy way: uv or pipx (isolated env, no virtualenv to manage)
uv tool install atlas-mind        # or: pipx install atlas-mind
atlas serve ~/my-mind

# Run once without installing, straight from PyPI
uvx atlas-mind serve ~/my-mind    # or: pipx run atlas-mind serve ~/my-mind

# With pip (a virtualenv is recommended)
pip install atlas-mind

Requires Python >= 3.11 and a git repository for your content.

Quick start

atlas init ~/my-mind     # scaffold a mind: atlas.toml, example docs, AGENTS.md, git init
atlas serve ~/my-mind    # build once if needed, then serve on http://127.0.0.1:8765

init is never destructive (it refuses a non-empty directory without --force and keeps any file already present). serve listens on 127.0.0.1:8765 with authentication off by default. To produce the static viewer without serving: atlas build ~/my-mind [--offline].

See atlas --help for all commands (user, token, share, deploy).

Use it with your AI (MCP)

Atlas Mind is designed to be the external memory your assistant reads and writes. On a deployed instance, each user mints their own token from the web UI — Settings → Tokens — bound to their account; it prints the MCP URL to point your AI at.

Locally (or to script it), the CLI does the same:

atlas token create ~/my-mind --label claude
# → prints the MCP URL: https://<your-atlas>/mcp/<token>

The MCP endpoint exposes twenty-four tools in six groups:

  • read: search_docs, read_doc, list_tree, recent_docs
  • write: create_doc, edit_doc, move_doc (fixes incoming [[backlinks]]), delete_doc (soft-delete to .trash/)
  • graph: get_links, get_backlinks, list_by_tag, get_mind_topology
  • time-travel (your mind is a git repo): doc_history, doc_at, doc_diff, search_history, changelog, doc_blame, doc_revert
  • activity (the attribution layer's read side): activity (who changed what, with AI-author detection), stale (docs untouched for months: obsolescence), contradictions (same-topic doc pairs to review), judge_contradiction (record a verdict on a pair)
  • inbox: create_inbox_item (an agent stages a ready-to-file item in your inbox for triage)

atlas init scaffolds AGENTS.md + content/agents/ + content/ai-sessions/ so the assistant knows your conventions. There is also a REST API v1 (Bearer tokens, create-only writes) with a published OpenAPI 3.1 spec.

Features

  • Reading: GitHub-flavoured Markdown (TOC, syntax highlighting, reading time, tag bar), inline preview of standalone HTML decks/dashboards, PDF, and .docx (converted in-browser, read-only). Download any file as its original.
  • Navigation: collapsible tree, full-text search (server-side online, fuzzy MiniSearch offline), [[wikilinks]] + backlinks + "same subject", folder/frontmatter tags, mind-wide task rollup, command palette (Ctrl-K), pinned and recent docs.
  • The Mind: a force-directed mind palace where every document and tag is a navigable node, colour-grouped by folder, recent nodes glowing, orphans dimmed.
  • Editing: create / edit / rename / move / delete from the viewer (moving rewrites the wikilinks pointing at a doc), document templates, interactive task checkboxes, a categorised todos widget.
  • History: every document git-versioned, with a revision list, clean diffs, view/restore of past versions (restore is a new commit), renames and moves followed.
  • Activity: a home card over the attributed git history — a journal of who-changed-what (with AI-author detection and a per-doc history peek), a constellation of contributors, and a Health view that surfaces stale documents (obsolescence) and same-topic contradiction candidates for your AI to review.
  • Inbox: a per-person triage lane on the home for the items your agents staged via MCP. One focused card at a time; keep (filed to a suggested folder and tags), trash or snooze, by click or keyboard (K / X / S / J).
  • Annotations: notes anchored to a text selection, re-anchored on later visits, with one-click copy-all-notes as Markdown.
  • Sharing: per-document access in cloud mode (private / shared with people or groups / common to the team), plus HMAC-signed public share links with optional expiry.
  • Offline & PWA: a self-contained index-offline.html that works from file://, an installable PWA via service worker, live reload over SSE.
  • i18n: French and English, a single carefully-built dark theme, re-skinnable via a CSS extension.

Self-hosting

  • Cloud mode: accounts and login (admin / member roles), per-document access control, cookie sessions, optional TOTP 2FA with recovery codes, per-account lockout and per-IP login rate limiting, full CSRF defence.
  • Deployment: atlas deploy ~/my-mind --target compose|systemd|fly; fly --wizard deploys end-to-end.
  • Configuration: a small atlas.toml (brand prefix, port, auth, content paths).
  • Updating: engine and content update independently, and upgrading the engine never touches your notes.

Documentation

The documentation is itself an Atlas mind — browse it in the live demo → (the guides/ and features/ sections).

Licence

AGPL v3, see LICENSE. The "Atlas" + "Mind" branding in the viewer and login page is a fixed part of the project.

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