Medikode Medical Coding MCP Server
Enables AI assistants to access Medikode's medical coding platform for validating CPT/ICD-10 codes, performing chart quality assurance, parsing EOBs, calculating RAF scores, and extracting HCC codes from clinical documentation.
README
@medikode/mcp-server
Model Context Protocol (MCP) server for Medikode's AI-driven medical coding platform. This package enables AI assistants like Claude Desktop, Cursor, and ChatGPT to access Medikode's medical coding tools directly.

Medikode's AI-driven medical coding platform dashboard showing API usage trends and analytics
🌟 Features
- 5 Powerful MCP Tools: Validate codes, QA charts, parse EOBs, calculate RAF scores, and more
- AI Assistant Integration: Works with Claude Desktop, Cursor, ChatGPT, and other MCP-compatible clients
- Secure: Uses your existing Medikode API keys with the same security and access controls
- Fast: Direct API access with caching for optimal performance
- Easy Setup: Simple configuration with npx - no local installation required
🚀 Quick Start
Installation
npm install -g @medikode/mcp-server
Configuration
Claude Desktop
Add to your claude_desktop_config.json:
{
"mcpServers": {
"medikode": {
"command": "npx",
"args": ["-y", "@medikode/mcp-server"],
"env": {
"MEDIKODE_API_KEY": "your_api_key_here"
}
}
}
}
Cursor IDE
Add to your cursor_settings.json:
{
"mcp": {
"servers": {
"medikode": {
"command": "npx",
"args": ["-y", "@medikode/mcp-server"],
"env": {
"MEDIKODE_API_KEY": "your_api_key_here"
}
}
}
}
}
🛠 Available Tools
1. validate_codes
Validates CPT/ICD-10 codes against clinical documentation.
Inputs:
chart_text(string, required): Provider note or chart excerptcodes(array[string], required): CPT/ICD-10 codes to validate
Outputs:
valid(boolean): Whether codes are valid for the chartrecommendations(array[string]): Missing or conflicting codes
2. qa_chart
Performs a coding quality assurance check.
Inputs:
chart_text(string, required): Clinical documentation to review
Outputs:
issues_found(array[string]): Documentation or coding gapssuggested_codes(array[string]): Recommended additional codes
3. parse_eob
Extracts structured data from Explanation of Benefits (EOB) documents.
Inputs:
eob_content(string, required): Raw EOB text (or PDF extracted text)
Outputs:
payer(string): Insurance payer nameclaim_number(string): Claim reference numbertotal_billed(number): Total amount billedtotal_allowed(number): Total amount allowed by payerinsurance_paid(number): Amount paid by insurancepatient_responsibility(number): Patient out-of-pocket amount
4. score_raf
Calculates RAF score and HCC capture from encounter documentation.
Inputs:
chart_text(string, required): Clinical encounter documentation
Outputs:
raf_score(float): Risk Adjustment Factor scorehcc_codes(array[string]): Hierarchical Condition Category codes
5. multi_validate
Composite workflow that validates chart coding and calculates RAF in one step.
Inputs:
chart_text(string, required): Clinical documentationcodes(array[string], optional): Optional codes to validate
Outputs:
validation_results(object): Results from validate_codesraf_results(object): Results from score_raf
💡 Example Usage
Once configured, you can use the tools in your AI assistant:
User: "Validate these codes for this chart: 99213, I10, E11.9"
AI: I'll help you validate those codes using the validate_codes tool...
[Tool call to validate_codes]
Based on the validation results:
- Code 99213: Valid for established patient office visit
- Code I10: Valid for essential hypertension
- Code E11.9: Valid for type 2 diabetes without complications
🔑 Authentication
All tools require a valid Medikode API key. You can obtain one by:
- Signing up at medikode.ai
- Generating an API key in your account settings
- Setting the
MEDIKODE_API_KEYenvironment variable
📊 Usage Tracking
All MCP tool usage is tracked and appears in your Medikode dashboard alongside regular API calls. This includes:
- Number of API calls made
- Charts processed
- EOBs parsed
- RAF scores calculated
🔧 Troubleshooting
Common Issues
MCP Server Not Found
- Ensure Node.js and npm are installed
- Verify the package is available via npx:
npx @medikode/mcp-server --help
Authentication Errors
- Check that your API key is correct and active
- Verify the
MEDIKODE_API_KEYenvironment variable is set - Ensure your API key has the required permissions
Tool Not Available
- Restart your AI client after configuration changes
- Verify the MCP server configuration is correct
- Ensure your AI client supports MCP
📚 Documentation
🛠 Development
Prerequisites
- Node.js 18.0.0 or higher
- npm or yarn
- Medikode API key
Local Development
-
Clone the repository:
git clone https://github.com/medikode/mcp-server.git cd mcp-server -
Install dependencies:
npm install -
Set up environment variables:
cp env.example .env # Edit .env with your API key -
Run in development mode:
npm run dev -
Test the MCP server:
npm run test:routing
Building
npm run build
Testing
# Test WebSocket connection
node test-websocket.js
# Test ChatGPT integration
python test-chatgpt-integration.py
# Test environment routing
node test-environment-routing.js
🤝 Contributing
We welcome contributions! Please see our Contributing Guidelines for details.
Development Workflow
- Fork the repository
- Create a feature branch:
git checkout -b feature/amazing-feature - Commit your changes:
git commit -m 'Add amazing feature' - Push to the branch:
git push origin feature/amazing-feature - Open a Pull Request
Code Style
- Use ESLint for JavaScript linting
- Follow the existing code style
- Add tests for new features
- Update documentation as needed
🐛 Bug Reports
Found a bug? Please open an issue with:
- Clear description of the problem
- Steps to reproduce
- Expected vs actual behavior
- Environment details (Node.js version, OS, etc.)
💡 Feature Requests
Have an idea for a new feature? We'd love to hear it! Please open an issue with:
- Clear description of the feature
- Use case and benefits
- Any implementation ideas you have
📊 Changelog
See CHANGELOG.md for a list of changes and version history.
🤝 Support
- Issues: GitHub Issues
- Documentation: docs.medikode.ai
- Email: support@medikode.ai
- Discord: Join our community
📄 License
ISC License - see LICENSE file for details.
🔗 Links
🙏 Acknowledgments
- Built with Model Context Protocol
- Powered by Medikode medical coding platform
- Thanks to all our contributors and users!
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