smart-fhir

smart-fhir

Enables read-only SMART on FHIR R4 discovery, search, and read operations against public synthetic sandboxes, returning actual empty results and 404s rather than inventing patient data.

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README

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smart-fhir

A connector that will not invent a patient.

MCP v1 transport stdio FHIR R4 4.0.1 SMART 2.2.0 writes off

tools 4 sandbox public synthetic empty search stays empty unknown id 404 PHI none

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Install · Tools · How it works · Limits

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<img src="assets/demo.svg" alt="smart-fhir: smart_discover OK, empty Patient search stays empty, unknown id is 404" width="100%">


Install

stdio only. After the TypeScript build, add a local connector:

name: smart-fhir
command: node
args: dist/index.js
npm install
npm run build

Env for that add (defaults, not secrets):

FHIR_ISS = https://launch.smarthealthit.org/v/r4/fhir
FHIR_VERSION = R4
FHIR_AUTH_MODE = open
FHIR_WRITE = off
FHIR_AUDIT_PATH = ./audit/audit.jsonl

Do not put secret values in the repo. No public HTTP port. Do not bind TCP.

Morning shortcut (same env)

npx -y tsx src/index.ts

See package.json scripts: install, build, test, prove.

Tools

Four tools. No create / update / delete.

Tool Action
smart_discover GET {iss}/.well-known/smart-configuration. Parsed JSON or explicit error. Does not invent endpoints.
fhir_auth_status { mode, iss, fhir_version: "R4", write: "off", token_present, discovery_ok, last_error? }. Never prints token or PEM.
fhir_search GET {iss}/{resourceType}?... _count default 10, max 50. One page. Empty Bundle is returned as-is.
fhir_read GET {iss}/{resourceType}/{id}. 404 is not found, not a made-up resource.

resourceType allowlist: Patient | Observation | Condition | MedicationRequest | Encounter. Anything else → { ok: false, error: "resourceType not in v1 allowlist" }.

How it works

FHIR_VERSION must be R4. Anything else refuses to start.

What URL How to read it
FHIR index (published page is R5 5.0.0) http://hl7.org/fhir/ Official index only. Not implemented.
FHIR R4 (v1) https://hl7.org/fhir/R4/ FHIR Release 4, 4.0.1. Resource model.
SMART App Launch 2.2.0 (STU 2.2) https://hl7.org/fhir/smart-app-launch/ Current published SMART IG. Based on FHIR R4.
App launch + authorization https://hl7.org/fhir/smart-app-launch/app-launch.html Discovery, standalone/EHR launch, PKCE, token. App Launch (code+PKCE) is out of v1.
Backend Services https://hl7.org/fhir/smart-app-launch/backend-services.html client_credentials + private-key JWT. Implemented; unused unless env is set.

ISS allowlist (trailing slash stripped, anything else refused):

  • https://launch.smarthealthit.org/v/r4/fhir (default)
  • https://r4.smarthealthit.org
  • https://hapi.fhir.org/baseR4

Set FHIR_ISS to another allowlisted base to point at a later ISS. A new ISS needs a review first. Do not point this at a live EHR without that review plus a real client_id.

FHIR_AUTH_MODE Behavior
open (default) Discover, then FHIR GET without Authorization. Discovery 404 is not fatal in open (logged; continue). 401/403 FHIR → { ok: false, http_status, ... }.
bearer Same discovery. FHIR GET with Authorization Bearer token.
backend_jwt Only if both FHIR_CLIENT_ID (or SMART_CLIENT_ID) and FHIR_PRIVATE_KEY_PEM exist. SMART Backend Services JWT. Missing env → refuse to start. Does not invent credentials.

App Launch (code+PKCE) is out. FHIR_REDIRECT_URI is reserved and unused.

Auth failure shape: { ok: false, http_status, issue?, error? }. Never a synthetic Patient.

FHIR_WRITE defaults off. v1 has no write tools even if someone sets on. Writes never POST AuditEvent to FHIR.

Name Default Notes
FHIR_ISS default launcher R4 Must stay allowlisted
FHIR_VERSION R4 Reject anything else
FHIR_AUTH_MODE open open / bearer / backend_jwt
FHIR_WRITE off Writes stay off in v1
FHIR_AUDIT_PATH /workspace/smart-fhir-mcp/audit/audit.jsonl Append-only JSONL; set ./audit/audit.jsonl locally
FHIR_ACCESS_TOKEN unset Bearer only
FHIR_CLIENT_ID unset Backend Services
SMART_CLIENT_ID unset Alias of FHIR_CLIENT_ID
FHIR_PRIVATE_KEY_PEM unset Backend Services JWT
FHIR_JWKS_URL unset Reserved if an EHR wants JWKS
FHIR_SCOPE five system/*.rs types JWT mode override
FHIR_REDIRECT_URI unset Reserved for later App Launch

Audit lines: ts, tool, iss, mode, resourceType, id?, http_status, entry_count?. No resource body, no token, no PEM, no name/MRN query values.

Limits

  • R5 / R4B as default. Extra resource types. CRUD. Bulk. App Launch browser/PKCE.
  • Real EHR / real PHI. Production deploy. Public bind or Streamable HTTP.
  • momentum / fhirhydrant / Atrium / Pinecone / Medplum.
  • Not a medical product. Does not diagnose, treat, or store PHI.

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No PHI. No live EHR.

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